Miscellaneous « « Myriad RBM
 
 

Bibliography

Miscellaneous

2014

Comparison of serum, EDTA plasma and P100 plasma for luminex-based biomarker multiplex assays in patients with chronic obstructive pulmonary disease in the SPIROMICS study (2014) O Neal WK, Anderson W, Basta PV, Carretta EE, Doerschuk CM, Barr RG, Bleecker ER, Christenson SA, Curtis JL, Han MK, Hansel NN, Kanner RE, Kleerup EC, Martinez FJ, Miller BE, Peters SP, Rennard SI, Scholand MB, Tal-Singer R, Woodruff PG, Couper DJ, Davis SM J Transl Med. 2014 Jan 8;12(1):9
 
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The Human Salivary Proteome is Radiation Responsive (2014) Moore HD, Ivey RG, Voytovich UJ, Lin C, Stirewalt DL, Pogosova-Agadjanyan EL, Paulovich AG Radiat Res. 2014 Apr 10. [Epub ahead of print]
 
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2013

Influence of Genetic Variation on Plasma Protein Levels in Older Adults Using a Multi-Analyte Panel (2013) Kim S, Swaminathan S, Inlow M, Risacher SL, Nho K, Shen L, Foroud TM, Petersen RC, Aisen PS, Soares H, Toledo JB, Shaw LM, Trojanowski JQ, Weiner MW, McDonald BC, Farlow MR, Ghetti B, Saykin AJ; Alzheimer’s Disease Neuroimaging Initiative (ADNI) PLoS One. 2013 Jul 23;8(7):e70269
 
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Cigarette smoke induces molecular responses in respiratory tissues of ApoE-/- mice that are progressively deactivated upon cessation (2013) Boué S, De León H, Schlage WK, Peck MJ, Weiler H, Berges A, Vuillaume G, Martin F, Friedrichs B, Lebrun S, Meurrens K, Schracke N, Moehring M, Steffen Y, Schueller J, Vanscheeuwijck P, Peitsch MC, Hoeng J Toxicology, Available online 1 October 2013
 
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Quantitative assessment of biological impact using transcriptomic data and mechanistic network models (2013) Thomson TM, Sewer A, Martin F, Belcastro V, Frushour B, Gebel S, Park J, Schlage WK, Talikka M, Vasilyev D, Westra JW, Hoeng J, Peitsch MC Toxicol Appl Pharmacol. 2013 Aug 7. pii: S0041-008X(13)00310-4
 
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Case study: the role of mechanistic network models in systems toxicology (2013) Hoeng J, Talikka M, Martin F, Sewer A, Yang X, Iskandar A, Schlage WK, Peitsch MC Drug Discovery Today, Available online 9 August 2013
 
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Can changes in angiogenic biomarkers between the first and second trimesters of pregnancy predict development of pre-eclampsia in a low-risk nulliparous patient population? (2013) Myatt L, Clifton R, Roberts J, Spong C, Wapner R, Thorp J Jr, Mercer B, Peaceman A, Ramin S, Carpenter M, Sciscione A, Tolosa J, Saade G, Sorokin Y, Anderson G; for the Eunice Kennedy Shriver National Institute of Child Health and Human Development Maternal-Fetal Medicine Units Network BJOG. 2013 Jan 18
 
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Integrative Omics Approach Identifies Interleukin-16 as a Biomarker of Emphysema (2013) Bowler RP, Bahr TM, Hughes G, Lutz S, Kim YI, Coldren CD, Reisdorph N, Kechris KJ OMICS. 2013 Oct 19. [Epub ahead of print]
 
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Intracellular Aggregation of Multimodal Silica Nanoparticles for (2013) Jokerst JV, Khademi C, Gambhir SS Sci Transl Med. 2013 Mar 20;5(177):177ra35
 
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Carbon nanotube dosimetry: from workplace exposure assessment to inhalation toxicology (2013) Erdely A, Dahm M, Chen BT, Zeidler-Erdely PC, Fernback JE, Birch ME, Evans DE, Kashon ML, Deddens JA, Hulderman T, Bilgesu SA, Battelli L, Schwegler-Berry D, Leonard HD, McKinney W, Frazer DG, Antonini JM, Porter DW, Castranova V, Schubauer-Berigan MK Part Fibre Toxicol. 2013 Oct 21;10(1):53
 
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Assessment of Inhibin B as a Biomarker of Testicular Injury Following Administration of Carbendazim, Cetrorelix, or 1,2-Dibromo-3-Chloropropane in Wistar Han Rats (2013) Moffit JS, Her LS, Mineo AM, Knight BL, Phillips JA, Thibodeau MS Birth Defects Research Part B Developmental and Reproductive Toxicology
 
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The role of LOX and LOXL2 in scar formation after glaucoma surgery (2013) Van Bergen T, Marshall D, Van de Veire S, Vandewalle E, Moons L, Herman J, Smith V, Stalmans I Invest Ophthalmol Vis Sci. 2013 Jul 2. pii: iovs.13-11696v1
 
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2012

Photoacoustic Imaging of Mesenchymal Stem Cells in Living Mice via Silica-Coated Gold Nanorods (2012) Jokerst JV, Thangaraj M, Kempen P, Sinclair R, Gambhir SS ACS Nano. 2012 Jun 10. [Epub ahead of print]
 
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In-depth analysis of the secretome identifies three major independent secretory pathways in differentiating human myoblasts (2012) Le Bihan MC, Bigot A, Jensen SS, Dennis J, Rogowska-Wrzesinska A, Lainé J, Gache V, Furling D, Jensen ON, Voit T, Mouly V, Coulton GR, Butler-Browne G J Proteomics. 2012 Sep 20. pii: S1874-3919(12)00652-5
 
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Identification of cis- regulatory variation influencing protein abundance levels in human plasma (2012) Lourdusamy A, Newhouse S, Lunnon K, Proitsi P, Powell J, Hodges A, Nelson SK, Stewart A, Williams S, Kloszewska I, Mecocci P, Soininen H, Tsolaki M, Vellas B, Lovestone S; on behalf of the AddNeuroMed Consortium, Dobson R; for the Alzheimer’s Disease Neuroimaging Initiative Hum Mol Genet. 2012 May 16. [Epub ahead of print]
 
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Molecular Sex Differences in Human Serum (2012) Ramsey JM, Schwarz E, Guest PC, van Beveren NJM, Leweke FM; Rothermundt M, Bogerts B, Steiner J, Ruta L, Baron-Cohen S, Bahn S PLoS ONE 7(12): e51504
 
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2011

Exploratory analysis of multiple omics datasets using the adjusted RV coefficient (2011) Mayer CD, Lorent J, Horgan GW Stat Appl Genet Mol Biol. 2011;10(1):Article 14
 
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Algorithm development for diagnostic biomarker assays (2011) Izmailov R, Guest PC, Bahn S, Schwarz E Int Rev Neurobiol. 2011;101:279-98
 
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Serum biomarkers of aging in the Brown Norway rat (2011) Gordon CJ, Rowsey PJ, Bishop BL, Ward WO, Macphail RC Exp Gerontol. 2011 Jul 28. [Epub ahead of print]
 
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Peripheral Blood Proteins Predict Mortality in Idiopathic Pulmonary Fibrosis (2011) Richards TJ, Kaminski N, Baribaud F, Flavin S, Brodmerkel C, Horowitz D, Li K, Choi J, Vuga LJ, Lindell KO, Klesen M, Zhang Y, Gibson KF Am J Respir Crit Care Med. 2011 Oct 20. [Epub ahead of print]
 
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Divergence Weighted Independence Graphs for the Exploratory Analysis of Biological Expression Data (2011) Xiang Y, Talikka M, Belcastro V, Sperisen P, Peitsch MC, Hoeng J, Whittaker J J Health Med Informat 2011, S2
 
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Short term inhalation toxicity of a liquid aerosol of CdS/Cd(OH)(2) core shell quantum dots in male Wistar rats (2011) Ma-Hock L, Brill S, Wohlleben W, Farias PM, Chaves CR, Tenório DP, Fontes A, Santos BS, Landsiedel R, Strauss V, Treumann S, van Ravenzwaay B Toxicol Lett. 2011 Oct 20. [Epub ahead of print]
 
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Efficacy and safety of lanthanoids as X-ray contrast agents (2011) Pietsch H, Jost G, Frenzel T, Raschke M, Walter J, Schirmer H, Hütter J, Sieber MA Eur J Radiol. 2011 Nov;80(2):349-56
 
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Building an integrated neurodegenerative disease database at an academic health center (2011) Xie SX, Baek Y, Grossman M, Arnold SE, Karlawish J, Siderowf A, Hurtig H, Elman L, McCluskey L, Van Deerlin V, Lee VM, Trojanowski JQ Alzheimers Dement. 2011 Jul;7(4):e84-e93
 
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Performance evaluation of a multiplex assay for future use in biomarker discovery efforts to predict body composition (2011) Bea JW, Wright NC, Thompson P, Hu C, Guerra S, Chen Z Clin Chem Lab Med. 2011 Mar 2. [Epub ahead of print]
 
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2010

A Semi-Targeted Plasma Proteomics Discovery Workflow Utilizing Two-Stage Protein Depletion and Off-Line LC-MALDI MS/MS (2010) Juhasz P, Lynch M, Sethuraman M, Campbell J, Hines W, Paniagua M, Song L, Kulkarni M, Adourian A, Guo Y, Li X, Martin S, Gordon N J Proteome Res. 2010 Oct 11. [Epub ahead of print]
 
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Cardiovascular
 

Quantitative Proteomic Plasma Profiling Reveals Activation of Host Defense to Oxidative Stress in Chronic SIV and Methamphetamine Comorbidity (2010) Pendyala G, Trauger SA, Siuzdak G, Fox HS AIDS Res Hum Retroviruses 2010 Oct 7. [Epub ahead of print]
 
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Sample size and statistical power considerations in high-dimensionality data settings: a comparative study of classification algorithms (2010) Guo Y, Graber A, McBurney RN, Balasubramanian R BMC Bioinformatics 11: 447.
 
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How informatics can potentiate precompetitive open-source collaboration to jump-start drug discovery and development (2010) Perakslis ED, Van Dam J, Szalma S Clin Pharmacol Ther 87: 614-616.
 
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Quantitative Multiplexed Patterning of Immune-related Biomarkers (2010) Eisenger D, McDade R, Joos T Biomarkers in Drug Development: A Handbook of Practice, Application, and Strategy . Ch. 6, p. 121-134
 
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Protein microarrays for personalized medicine (2010) Yu X, Schneiderhan-Marra N, Joos TO Clin Chem. 56: 376-87.
 
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2009

High content analysis of human fibroblast cell cultures after exposure to space radiation (2009) Dieriks B, De Vos W, Meesen G, Van Oostveldt K, De Meyer T, Ghardi M, Baatout S, Van Oostveldt P Radiat Res. 172: 423-36.
 
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Bead-based Multiplexed Immunoassays to Identify New Biomarkers in Maternal Serum to Improve First Trimester Down Syndrome Screening. (2009) Koster MP, Pennings JL, Imholz S, Rodenburg W, Visser GH, de Vries A, Schielen PC Prenat Diagn 29: 857-862.
 
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A Novel ENU-induced Mutation, Peewee, Causes Dwarfism in the Mouse. (2009) Lee B, Kano K, Young J, John SW, Nishina PM, Naggert JK, Naito K Mamm Genome 20: 404-413.
 
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A Multianalyte Profile of Serum Proteins to Screen for Toxicological Effects of Anticholinesterase Insecticides in the Rat. (2009) Gordon CJ, Ward WO Neurotoxicology 30: 377-381.
 
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Value of new biomarkers for safety testing in drug development (2009) Hewitt P and Herget T Expert Rev Mol Diagn.9: 531-6.
 
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Multiplex Immunoassay Analysis of Biomarkers in Clinically Accessible Quantities of Human Aqueous Humor. (2009) Sharma RK, Rogojina AT, Chalam KV Mol Vis 15: 60-69.
 
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2008

Biomarker Sample Collection and Handling in the Clinical Setting to Support Early-Phase Drug Development (2008) Russell CB, Suggs S, Patterson SD Methods in Pharmacology and Toxicology; Biomarker Methods in Drug Discovery and Development
 
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2007

Pulmonary delivery of adenovirus vector formulated with dexamethasone-spermine facilitates homologous vector re-administration. (2007) Price AR, Limberis MP, Wilson JM, Diamond SL Gene Ther 14: 1594-1604.
 
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2006

A Phase II Pilot Trial of Low Dose, Continuous Infusion, or "Metronomic", Paclitaxel and Oral Celecoxib in Patients with Metastatic Melanoma (2006) McDermott DF, Cho DC, Merchan JR, Bhatt RS, Seery V, Mosher JL, Farquhar MB, Mier JW, Atkins MB, Sukhatme VP Journal of Clinical Oncology, 2006 ASCO Annual Meeting Proceedings Part I. 24(18S)
 
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Effects of hyperglycemia and insulin therapy on outcome in a hyperglycemic septic model of critical illness. (2006) Heuer JG, Sharma GR, Zhang T, Ding C, Bailey DL, Stephens EJ, Holmes KC, Grubbs RL, Fynboe KA, Chen YF, Jakubowski JA J Trauma 60: 865-872.
 
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Testing the Viability of Stored Frozen Serum Samples from the Air Force Health Study Using Human Multi-Analyte Profiles (MAPS) (2006) Fox K and Pavuk M Organohalogen Compounds. 2006 68: 1390-1393
 
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2005

Mkks-null mice have a phenotype resembling Bardet-Biedl syndrome. (2005) Fath MA, Mullins RF, Searby C, Nishimura DY, Wei J, Rahmouni K, Davis RE, Tayeh MK, Andrews M, Yang B, Sigmund CD, Stone EM, Sheffield VC Hum Mol Genet 14: 1109-1118.
 
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2004

Validation of a new highly standardised, lab-independent whole-blood leukocyte function assay for clinical trials (ILCS). (2004) Schmolz M, Hurst TL, Bailey DM, Powell JR, Forsey RJ, Thompson JM, Williams C, Pawelec G Exp Gerontol 39: 667-671.
 
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